The edge effect is one of the consequences of forest fragmentation and is one of the main drivers of alteration of ecological and ecosystem processes. Trophic guilds and species of bats have shown differential responses to this phenomenon. Our goal was to describe the change in bat species richness, abundance, evenness, and species composition of trophic guilds associated with a matrix edge-forest interior gradient. Therefore, we conducted a bat sampling with 16 mist nets covering such gradient in four sub-andean forest fragments (10-50 ha). In total, we captured 566 individuals of 21 species of phyllostomid bats. Bat species richness and abundance were higher in the matrix and edge and were similar between fragments. Evenness showed the lowest values in the matrix and forest edge and was different between forest patches. Some shrub frugivorous bats were more abundant in the edge, and others were more abundant in two fragments. Species composition of canopy frugivorous bats was similar along the gradient but was significantly different between fragments. In contrast, the species composition of nectarivores was similar throughout the matrix-interior forest gradient and between patches. Our data suggest that bat responses at assemblage-level are affected by the disturbance gradient from the matrix to forest interior, even at short distances form fragment borders, and are dependent on the trophic guild.